Browsing by Subject "Heritability"
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Item Improvement of Work-to-Break Characteristics of Cotton (Gossypium hirsutum L.) Fibers and Yarn through Breeding and Selection for Improved Fiber Elongation(2012-11-12) Osorio Marin, Juliana 1982-The development of cottons with improved fiber quality has been a major objective in breeding programs around the world. Breeders have focused their attention on improving fiber strength and length, and have generally not used fiber elongation in the selection process. Although literature has reported a negative correlation between fiber elongation and tenacity, this correlation is weak and should not prevent breeders from simultaneously improving fiber tenacity and fiber elongation. Furthermore, the work of rupture property, important in the spinning process, could be best enhanced by improving both fiber tenacity and fiber elongation. Fifteen populations were developed in 2007 by crossing good quality breeding lines with high elongation measurements to ?FM 958?; a High Plains standard cultivar with good fiber quality but reduced elongation. Samples in every generation were ginned on a laboratory saw gin, and the lint was tested on HVI (High Volume Instrument). The F2 and F3 generations showed a wide range of variation for elongation (6.9% - 12.8% for the F2 and 4% - 9.20% for the F3) allowing divergent selection for low and high fiber elongation. A correlation (r) of -0.32 between strength and elongation was observed in the F2 individual plant selections. In the F3, the correlation (r) between strength and elongation was -0.36, and in the F4 the correlation (r) was -0.08. Nine lines were selected from the original 15 populations for spinning tests. The correlation between fiber elongation and strength for these lines was positive (r=0.424), indicating that with targeted selection, fiber elongation and strength can be simultaneously improved. Fiber elongation was positively correlated with yarn tensile properties tenacity (r=0.11), work-to-break (r=0.68) and breaking elongation (r=0.87); and was negatively correlated with yarn evenness properties, number of thin places (r=-0.16), number of thick places (r=-0.9), nep count (r=-0.24), hairiness (r=-0.38) and total number of imperfections (r=-0.38). All selections for high elongation were superior for all tensile properties compared to the low selections and the check in the analysis over locations and in each location. Furthermore, selections for high elongation were significantly different from the selections for low elongation and the check. In addition to developing lines for fiber spinning tests with improved, or differentiated, fiber elongation, this project was amended to evaluate and determine the heritability of fiber elongation. Three different methodologies were used to obtain estimates of heritability; variance components, parent off-spring regression, and realized heritability using F3, F4, and F5 generation. No inbreeding was assumed because there was no family structure in the generations within this study. Estimates of heritability by the variance component methods in the F3, F4 and F5 were 69.5%, 56.75% and 47.9% respectively; indicating that 40-50% of the variation was due to non-genetic effects. Parent off-spring regression estimates of heritability were 66.1% for the F3-4 and 62.8% for the F4-5; indicating a high resemblance from parents to off-spring. Estimates of realized heritability were obtained to determine the progress realized from selection for the low and high selection for fiber elongation. Estimates were intermediate (0.44?0.55), indicating moderately good progress from selection. The results from this project demonstrate that it is possible to improve fiber elongation and to break the negative correlation between elongation and strength. Furthermore, it has been demonstrated that improving fiber elongation results in the increase of length uniformity index and decreased short fiber content. Additionally, directed divergent selection was a successful methodology for the improvement of fiber elongation, and was useful to demonstrate that higher fiber elongation has a positive effect on yarn tensile properties, yarn evenness and processing. The development of new cultivars with improved fiber elongation will improve the quality and reputation of U. S.-grown cotton. The ultimate result will be better yarn quality and improved weaving efficiency, and particularly address current weaknesses in U. S. ?grown cotton cultivars, especially from the High Plains of Texas, of more short fiber content, lower uniformity ratios, and weaker yarn strength.Item Investigating local adaptation in a reef-building coral(2014-08) Kenkel, Carly Danielle; Matz, Mikhail V.Environmental variation is ubiquitous in natural systems. The genetic and physiological mechanisms governing population-level responses to this variation will impact the process of speciation and the capacity for populations to persist in a changing climate. Until recently, population-level responses to environmental selection remained largely unexplored in marine systems due to the historical assumption that the inherently dispersive nature of most marine taxa would preclude their ability to specialize to local environments. This dissertation represents the first investigation of population-level responses to environmental variation in a Caribbean reef-building coral. This research integrates ecological, physiological, genetic and genomic methods to (1) determine patterns of local adaptation in the Florida Keys, (2) identify stressors driving adaptive responses, (3) distinguish the physiological and genetic mechanisms underlying coral adaptation and (4) assess the potential for future adaptation in the common reef-building coral Porites astreoides. Results demonstrate that corals adapt and/or acclimatize to their local habitat and that this specialization incurs fitness costs. Temperature differences between reefs likely play a selective role in differentiating inshore and offshore coral populations. Genetic and gene expression differences indicate that coral hosts play a substantial role in driving these population-level differences. Inshore corals exhibit greater gene expression plasticity, which may be involved in stabilizing physiological responses to temperature fluctuations experienced at inshore reefs. In addition, naïve juvenile coral recruits from inshore reefs exhibit a growth rate advantage over offshore recruits under elevated temperature treatment, suggesting that thermotolerance differences observed in adult populations could continue to evolve in response to climate change. Taken together these results provide novel insight into the drivers of reef decline in the Florida Keys and the role of the host in coral adaptation capacity.Item Quantitative genetics and genotype by environment interactions for flowering time and floral morphology in Ipomopsis longiflora subsp. australis (Polemoniaceae)(2015-05) Soule, Jacob Walden; Juenger, Thomas; Linder, Craig RFlowering phenology and floral morphology are both directly tied to overall reproductive success of flowering plants. The match between pollinator abundance and timing of flowering can greatly affect plant fitness, and flower shape and size affect attractiveness of plants to pollinators. I measured quantitative genetic parameters for flowering time (date of first flower) and floral morphology in a polycarpic desert annual, Ipomopsis longiflora subsp. australis to determine the potential for these traits to respond to selection. Significant heritabilities and coefficients of genetic variation (CVA) were found for flowering phenology and most of the floral traits measured, indicating these traits can likely respond to natural selection in natural populations. Although significant genetic correlations were calculated between many of the floral characters to assess possible constraints on floral evolution, none were detected between flowering time and floral morphology. Flowering time did have a significant genotype-by-environment interaction (GxE) in response to greenhouse and field growing conditions, indicating that there is genetic variation in plasticity for flowering time in Ipomopsis longiflora. Plasticity in flowering time may be adaptive in Ipomopsis longiflora due to temporally varying selection pressures associated with differing growing and reproductive seasons faced in the desert southwest.Item Quantitative trait loci affecting the agronomic performance of a Sorghum bicolor (L.) Moench recombinant inbred restorer line population(Texas A&M University, 2004-09-30) Moran Maradiaga, Jorge LuisLately the rate of genetic gain in most agronomic crop species has been reduced due to several factors that limit breeding efficiency and genetic gain. New genetic tools and more powerful statistical analyses provide an alternative approach to enhance genetic improvements through the identification of molecular markers linked to genomic regions or QTLs controlling quantitative traits. The main objective of this research was to identify genomic regions associated with enhanced agronomic performance in lines per se and hybrid combination in Sorghum bicolor (L.) Moench. A population composed of 187 F5:6 recombinant inbred lines (RIL) was derived from the cross of restorer lines RTx430 and RTx7000. Also, a testcross hybrid population (TCH) was developed by using each RIL as a pollinator onto ATx2752. A linkage map was constructed using 174 marker loci generated from AFLP and SSR primer combinations. These markers were assigned to 12 different linkage groups. The linkage map covers 1573 cM with marker loci spaced at an averaged 9.04 cM. In this study, 89 QTL that control variation in seven different morphological traits were identified in the recombinant inbred line population, while in the testcross hybrid population, 79 QTL were identified. These traits included grain yield, plant height, days to mid-anthesis, panicle number, panicle length, panicle exsertion and panicle weight. These putative QTL explained from 4 to 42% of the phenotypic variation observed for each trait. Many of the QTL were not consistent across populations and across environments. Nevertheless, a few key QTL were identified and the source of the positive additive genetics isolated. RTx7000 was consistently associated with better agronomic performance in RIL, while in testcrosses, RTx430 was. Some genomic regions from RTx7000 may be utilized to improve RTx430 as a line per se. However, it is very unlikely that such regions will have a positive effect on the combining ability of RTx430 since testcross results did not reveal any transgressive segregants from the RIL population.Item Understanding coral dispersal(2014-05) Davies, Sarah Whitney; Matz, Mikhail V.Understanding the factors influencing species ranges and dispersal are becoming increasingly important as climate change alters species distributions worldwide. If species are to persist, life-history strategies must rapidly evolve to accommodate shifting environments. This dissertation assesses the factors modulating dispersal in corals. First, I examined if there were any systematic differences in settlement between Indo-Pacific and Caribbean coral larvae that might explain Caribbean recruitment failures. No differences were observed, however I detected significant divergences in settlement cue preferences among coral species across both the Caribbean (Diploria strigosa, and Montastraea franksi) and the Indo-Pacific (Acropora tenuis, A. millepora, and Favia lizardensis), even for coral larvae from the same reef. Secondly, I established the extent of coral dispersal between remote reefs. I evaluated the genetic diversity and divergence across Micronesia for two coral species and investigated if these islands served as a connectivity corridor between the Indo-West-Pacific (Coral Triangle) and the Central Pacific. I found isolation-by-distance patterns whose strength depended on species, suggesting these corals are not panmictic across their ranges and that island stepping-stones facilitate gene flow to remote Pacific reefs. Next, I investigated genetic structure of symbionts in these same corals, to see if horizontally transmitted symbionts are less dispersive than their coral hosts. Symbiont genetic divergence between islands was an order of magnitude larger than host divergence and both host species and environment modulated symbiont composition. These results suggest that symbiont populations are host-specific and associating with local symbionts might be a mechanism for broadly dispersing corals to adapt locally. Lastly, I estimated heritable variation in dispersal-related traits in coral larvae. I observed strong heritable variation in gene expression, as well as parental effects on two phenotypic traits, settlement and fluorescence. I observed that patterns of differential expression in three-day-old larvae predicted variation in settlement and fluorescence two days later. Correlations between proteoglycan expression and settlement suggest that the larval extracellular matrix plays a role in settlement. Down-regulation of ribosomal proteins and differential expression of oxidative stress genes correlated with increasing fluorescence, possibly indicating reduced growth and increased stress. Overall, this dissertation contributes to our knowledge of factors affecting coral dispersal and the potential for evolution of dispersal-related traits.Item Will super juniper-eating sires produce super juniper-eating offspring?(2011-03-03) Tidwell, Kendall W.; Tidwell, Kendall; Scott, Cody B.; Simpson, Warren K.; Walker, John W.; Salisbury, Micheal W.; Angelo State University. Department of Agriculture.When preconditioned in pens, goats develop a preference for juniper on pasture. The objective of this study was to see if sires selectively bred for high juniper consumption produce offspring that consume more juniper than offspring from sires chosen for production characteristics. Five sires chosen for high juniper consumption and five sires chosen for production characteristics were bred to 7 does each (n= 70). Kids were weaned at 90 days of age and placed in individual pens for feeding trials. Consumption of juniper was measured and compared among sire groups. Body condition scores and weights were taken and compared among sire groups after goats were on feed for 30 days following each feeding trial. There were no differences in juniper consumption, body condition scores, and weights among treatments. Goats increased juniper consumption daily in individual pens.