Browsing by Subject "nickel"
Now showing 1 - 2 of 2
Results Per Page
Sort Options
Item Computational Benchmarking in Biomimetic Nickel, Copper, and Iron Complexes(2012-02-14) Brothers, Scott MichaelSophisticated catalytically active sites of metalloenzymes provide inspiration to synthetic chemists, as the metal coordination environments are often atypical to those found on the chemist's benchtop. Furthermore, metal-ligand cooperativity using earthabundant metals is anticipated to eventually supplant noble metals, currently used in industrial catalysis. Despite progress in synthesis of small molecule active site models, reproduction of the enzymatic function is rarely observed. However, differences that might define catalytic efficiency of enzymes can be addressed by theory. Density functional theory, or DFT, has been developed as an in silico tool to complement and interpret crystallographic and spectroscopic results or to make predictions in the absence of experimental data. In this dissertation, such techniques serve to elucidate the observed reactivity or electronic character of both nickel and copper bound in square planar N?S? ligand fields, and of {Fe(NO)?} units, respectively. Nickel and copper complexes in tetraanionic N?S??? ligand environments were investigated with respect to change of metal, to modification of ligand environment, and to response in reactivity of thiolate sulfur atoms. From the DFT calculations and consistent with experimental observations, it was discovered that binding of a nucleophile at one thiolate sulfur effectively decreases reactivity of the second sulfur, and nucleophilic binding at both sulfurs serves to deactivate the complex toward further thiolate reactivity. Additionally, despite both Cu and Ni binding comfortably in the N?S??? coordination sphere, the former displays increased ionicity versus the latter, demonstrated by electrostatic potential mapping. A methodology for accurate modeling of geometry and vibrational frequencies of complexes containing a {Fe(NO)?} unit was determined from the results of a test set of complexes using a matrix of functionals and basis sets. Utilizing the optimum performer, the BP86 functional and a mixed SDD ECP basis set on iron and 6-311++G(d,p) on other atoms, a series of iron dinitrosyl complexes containing diverse ancillary ligands spanning the spectrochemical series was subsequently investigated. The electrochemical potentials of the pairs of "oxidized" and "reduced" DNIC complexes were evaluated for values occurring in the biological regime. Furthermore, as the {Fe(NO)?} unit is capable of coordination in interesting yet dissimilar geometric motifs, bimetallic, tetrameric, and adamantane-like DNIC complexes have been investigated with our DFT methodology.Item Impact of the ligands on linear trimetal chains(Texas A&M University, 2004-09-30) Lei, PengIncreasing attention has been given to the preparation and study of compounds with linear chains of metal atoms surrounded by four ligands. The majority of linear trimetal complexes are supported by dpa, the anion of dipyridylamine, having the general formula M3(dpa)4X2, where X is typically a monoanion. It has been shown that the behavior of the trinuclear system is far more complicated than might have been expected. Specifically, both symmetrical and unsymmetrical chains can occur and the interpretation of the magnetic properties of certain compounds has been a challenging task. Present in this dissertation is the bulk of work completed on an exploration of syntheses and characterizations of linear trichromium and trinickel compounds with different types of tridentate ligands. These ligands include 2,6-bis(phenylamino)pyridine,H2BPAP, (the corresponding dianion of this is denoted by BPAP) and a set of five unsymmetrical formamidines with different organic substituents ranging from strong electron-donating groups, such as -OCH3, to electron-withdrawing groups, e.g., F. Ligands impact on the trimetal chain in various ways. In the case of the M3(BPAP)42- ions, there are no axial interactions because these anionic species do not attract electron donating ligands. Thus they have properties which are different from those of M3(dpa)4X2 molecules. Most notably, the Ni3(BPAP)42- ion is diamagnetic and all three nickel ions can be described as square-planar, low-spin NiII centers. ivWhen unsymmetrical formamidines are used to support linear trichromium chains with a Cl anion at each end, the separation between terminal chromium atoms is significantly longer (ca. 0.15 - 0.25) than those in trichromium compounds reported earlier. Moreover, the unsymmetrical formamidinates tend to support symmetrical trichromium chains, while the rest of the known tridentate ligands typically yield unsymmetrical Cr36+ chains. The synthesis and structural studies of trinickel compounds with unsymmetrical formamidines are also presented.