Browsing by Subject "Astrophysics"
Now showing 1 - 13 of 13
Results Per Page
Sort Options
Item Astrophysical radiation environments of habitable worlds(2006) Smith, David Samuel; Scalo, John M.Numerous astrophysical sources of radiation affect the environment of planets orbiting within the liquid-water habitable zone of main-sequence stars. This dissertation reaches a number of conclusions about the ionizing radiation environment of the habitable zone with respect to X-rays and gamma-rays from stellar flares and background Galactic cosmic rays. Gamma-rays and X-rays incident on terrestrial-like exoplanet atmospheres can be efficiently reprocessed into diffuse UV emission that, depending on the presence of atmospheric UV absorbers, can reach the surface. Extreme solar X-ray flares over the last 4.6 Gyr could have delivered large enough radiation doses to the Martian surface to sterilize any unprotected organisms, depending on the largest energy releases possible. These flares also pose a significant hazard to manned space missions, since a large flare can occur with little or no warning during an extravehicular activity. A flare as large as the largest observed could deliver radiation doses exceeding safety limits to an astronaut protected by only a spacesuit. With respect to particle radiation, the nature of Galactic cosmic-ray modulation by astrospheres means that habitable-zone cosmic-ray fluxes change by much larger magnitudes when passing through low-densities regions of the interstellar medium. In contrast to the popular idea that passages through dense molecular clouds are required to significantly enhance Galactic cosmic-ray fluxes and affect planets’ electrical circuits, background mutation rates, and climates, we find that densities of only 0.1–10 cm−3 , the densities of most interstellar clouds, are sufficient to bring fluxes close to the full, interstellar level. Finally, passages through dense molecular clouds are necessary to shrink astrospheres to within the habitable zone, but such events produce even higher interstellar hydrogen and dust accretion rates than have been estimated because of the combination of enhanced charge-exchange rates between stellar-wind ions and interstellar neutrals and the growing importance of the central star’s gravity on particle trajectories as the astrosphere shrinks.Item Creating and measuring white dwarf photospheres in a terrestrial laboratory(2014-08) Falcon, Ross Edward; Winget, Donald Earl, 1955-As the ultimate fate of nearly all stars, including our Sun, white dwarfs (WDs) hold rich and informative histories in their observable light. To determine a fundamental parameter of WDs, mass, we perform the first measurement of the average gravitational redshift of an ensemble of WDs. We find a larger mean mass than that determined from the primary and expansive technique known as the spectroscopic method. The potential inaccuracy of this method has broad astrophysical implications, including for our understanding of Type 1a supernova progenitors and for constraining the age of the Universe. This motivates us to investigate the WD atmosphere models used with the spectroscopic method, particularly the input theoretical line profiles, by developing a new experimental platform to create plasmas at WD photospheric conditions (T_e ~ 1 eV, n_e ~ 10^17 cm^-3). Instead of observing WD spectra to infer the plasma conditions at the surface of the star, we set the conditions and measure the emergent spectra in the laboratory. X-rays from a z-pinch dynamic hohlraum generated at the Z Pulsed Power Facility at Sandia National Laboratories irradiate a gas cell to initiate formation of a large (120x20x10 mm or 24 cm^3) plasma. We observe multiple Balmer lines from our plasma in emission and in absorption simultaneously along relatively long (~120 mm) lines of sight perpendicular to the heating radiation. Using a large, radiation-driven plasma aides us to achieve homogeneity along our observed lines of sight. With time-resolved spectroscopy we measure lines at a range of electron densities that spans an order of magnitude, and we do this within one pulsed power shot experiment. Observing our plasma in absorption not only provides the signal-to-noise to measure relative line shapes, it allows us to measure relative line strengths because the lines share the same lower level population. This constrains the theoretical reduction factors used to describe ionization potential depression or the occupation probabilities associated with these Balmer lines. We compare our measured line shapes with the theoretical ones used in WD atmosphere models as part of the first fruits of this rich experimental platform.Item The development of replicated optical integral field spectrographs and their application to the study of Lyman-alpha emission at moderate redshifts(2015-08) Chonis, Taylor Steven; Hill, Gary J.; Finkelstein, Steven L; Gebhardt, Karl; Greene, Jenny E; Jaffe, Daniel TIn the upcoming era of extremely large ground-based astronomical telescopes, the design of wide-field spectroscopic survey instrumentation has become increasingly complex due to the linear growth of instrument pupil size with telescope diameter for a constant spectral resolving power. The upcoming Visible Integral field Replicable Unit Spectrograph (VIRUS), a baseline array of 150 copies of a simple integral field spectrograph that will be fed by 33,600 optical fibers on the upgraded Hobby-Eberly Telescope (HET) at McDonald Observatory, represents one of the first uses of large-scale replication to break the relationship between instrument pupil size and telescope diameter. By dividing the telescope's field of view between a large number of smaller and more manageable instruments, the total information grasp of a traditional monolithic survey spectrograph can be achieved at a fraction of the cost and engineering complexity. To highlight the power of this method, VIRUS will execute the HET Dark Energy Experiment (HETDEX) and survey ~420 square degrees of sky to an emission line flux limit of ~1e-17 erg/s/cm^2 to detect ~1e6 Lyman-alpha emitting galaxies (LAEs) as probes of large-scale structure at redshifts of 1.9Item Experimental study of the hydrodynamics of high Mach number blast waves(2005) Edens, Aaron Douglas; Ditmire, Todd R.We have performed a series of experiments examining the properties of high Mach number blast waves. Preliminary experiments were conducted on the Janus laser at Lawrence Livermore National Laboratory while the majority of experiments were carried out on the Z-Beamlet laser at Sandia National Laboratories. We created blast waves in the laboratory by using 10 J- 1000 J laser pulses to illuminate millimeter scale solid targets immersed in gas. The experimental results can be grouped into three categories. Firstly, we confirmed the importance of line radiation on the evolution of the blast wave and that this importance increased with the atomic number of the gas used. This was determined through three measurements: Interferometric measurements of the size of the radiative precursor preceding the blast front, measurements of the blast wave trajectory, and measurements of the size of additional blast waves created by the radiation ablating material in the blast wave path. The second set of experiments examined the effect of the passage of a laser pulse on the subsequent evolution of the created blast wave. We find that the laser’s passage creates a warm channel of gas where a blast wave travels at higher velocity than it does through unperturbed gas. This creates a bulge-like feature on the blast wave surface. This effect is magnified in higher atomic number gases where multi-photon ionization is more prevalent, causing additional energy to be deposited in the gas. The final set of experiments studied the validity of theories forwarded to explain the dynamics of perturbations on astrophysical blast waves. These experiments consisted of a systematic scan of the decay rates of perturbations of known primary mode number induced on the surface of blast waves by means of a regularly spaced wire array. The amplitude of the induced perturbations relative to the radius of the blast wave was tracked and fit to a power law in time. Measurements were taken for a number of different mode numbers and background gasses and the results show qualitative agreement with previously published theories for the hydrodynamics of thin shell blast wave.Item Hydrodynamic instabilities of radiative blast waves(2013-12) Kim, In Tai; Ditmire, Todd R.We present the results from a series of experimental investigations into the hydrodynamic instabilities that occur in radiative blast waves. In particular, we examine the Vishniac instability in which the perturbation modes oscillate in time and, for certain mode numbers and polytropic index of the medium, can exhibit a growth in their amplitudes. Experiments were conducted on the GHOST laser laboratory in which a source of atomic clusters was irradiated by a 1J-2J, 115fs laser pulse to produce cylindrical blast waves. The thrust of this thesis falls into two categories. First, we analyze the effects radiative cooling has on the evolution of blast waves such as the lowering of the effective polytropic index and consequently the lowering of their deceleration parameter. Radiation from the blast wave surface results in a preheated ionization precursor in the upstream material and is indicated by a gradual decline in the electron density profile of the blast wave rather than a sharp jump. This mechanism, if strong enough, can also create a secondary shock wave to form ahead of the main blast wave. The second set of experiments investigates the temporal evolution of longitudinal perturbations induced on the blast waves by use of a transverse interferometric beam that modifies the cluster medium prior to the onset of the main pump beam. These perturbations are analyzed and compared to theory set forth in Vishniac's mechanism for oscillatory instabilities and their growth rate.Item Lorentz-violating dark matter(2009-05-15) Mondragon, Antonio RichardObservations from the 1930s until the present have established the existence of dark matter with an abundance that is much larger than that of luminous matter. Because none of the known particles of nature have the correct properties to be identified as the dark matter, various exotic candidates have been proposed. The neutralino of supersymmetric theories is the most promising example. Such cold dark matter candidates, however, lead to a conflict between the standard simulations of the evolution of cosmic structure and observations. Simulations predict excessive structure formation on small scales, including density cusps at the centers of galaxies, that is not observed. This conflict still persists in early 2007, and it has not yet been convincingly resolved by attempted explanations that invoke astrophysical phenomena, which would destroy or broaden all small scale structure. We have investigated another candidate that is perhaps more exotic: Lorentz-violating dark matter, which was originally motivated by an unconventional fundamental theory, but which in this dissertation is defined as matter which has a nonzero minimum velocity. Furthermore, the present investigation evolved into the broader goal of exploring the properties of Lorentz-violating matter and the astrophysical consequences ? a subject which to our knowledge has not been previously studied. Our preliminary investigations indicated that this form of matter might have less tendency to form small-scale structure. These preliminary calculations certainly established that Lorentz-violating matter which always moves at an appreciable fraction of the speed of light will bind less strongly. However, the much more thorough set of studies reported here lead to the conclusion that, although the binding energy is reduced, the small-scale structure problem is not solved by Lorentz-violating dark matter. On the other hand, when we compare the predictions of Lorentz-violating dynamics with those of classical special relativity and general relativity, we find that differences might be observable in the orbital motions of galaxies in a cluster. For example, galaxies ? which are composed almost entirely of dark matter ? observed to have enlarged orbits about the cluster center of mass may be an indication of Lorentz violation.Item Magnetic instabilities and resulting energy conversion in astrophysics(2013-08) Kagan, Daniel Ross; Milosavljević, MilošBecause the universe is primarily composed of plasma, the interaction of plasmas and magnetic fields is of great importance for astrophysics. In this dissertation, we investigate three magnetic instabilities and examine their possible effects on astrophysical objects. First, we model solar coronal structures as Double Beltrami states, which are the lowest energy equilibria of Hall magnetohydrodynamics. We find that these states can undergo a catastrophe with characteristics similar to those of a solar eruption, such as a flare or coronal mass ejection. We then investigate magnetic reconnection and particle acceleration in moderately magnetized relativistic pair plasmas with three-dimensional particle-in-cell simulations of a kinetic-scale current sheet. We find that in three dimensions the tearing instability produces a network of interconnected and interacting magnetic flux ropes. In its nonlinear evolution, the current sheet evolves toward a three-dimensional, disordered state in which the resulting flux rope segments contain magnetic substructure on kinetic scales and sites of temporally and spatially intermittent dissipation. We find that reconnection produces significant particle acceleration, primarily due to the electric field in the X-line regions between flux ropes; the resulting particle energy spectrum can extend to high Lorentz factors. We find that the highest energy particles are moderately beamed within.Item Magnetofluid dynamics in curved spacetime : theory and application(2016-05) Bhattacharjee, Chinmoy; Hazeltine, R. D. (Richard D.); Mahajan, Swadesh M.; Berk, Herbert; Bohm, Arno; Yoshida, ZenshoA grand unified field tensor [Greek capital letter Mu] [Greek small letter mu] [Greek small letter nu] is constructed from Maxwell's field tensor and appropriately modified flow field, both nonminimally coupled to gravity, to analyze the dynamics of hot charged fluids in curved background space-time. With suitable 3+1 decomposition, this new formalism of hot fluid is then applied to investigate vorticity generation and a class of states known as the Beltrami-Bernoulli (BB) equilibria in the accretion disk around Schwarzschild and Kerr black holes. Of the two principle sources of vorticity i.e. baroclinic and relativistic, the relativistic drive peaks near innermost (isco) circular orbit for both black holes, whereas baroclinic drive dominates at larger distances. For General Relativity as well as modified gravity, the Kerr geometry leads to a ``stronger" vorticity generation than its Schwarzschild counterpart. On the other hand, modelling the disk plasma as a Hall MHD system, it has been shown that velocity/magnetic decay rate gets altered due to space time curvature, for example the velocity profile in BB states deviate substantially from the predicted geodesic velocity profiles. Moreover, these equilibrium states have their origin in the two helicity invariants which conspire to introduce a new oscillatory length scale into the system that is strongly influenced by relativistic and thermal effects. Consequences of this formalism are also discussed in several astrophysical settings.Item Monte-Carlo simulations of a comptonization model for the photospheric process(2015-08) Hernandez, Roberto Amilcar; Dicus, Duane A.; Kumar, PawanThis thesis presents the results of numerical simulations of an InverseCompton scattering model for the photospheric process. We use a Monte-Carlo method to simulate the processing and broadening of Planckian radiation below the Thomson photosphere of hot relativistic outflows. A new numerical code was developed and allowed us to explore a completely new region of the parameter space, in particular a higher and more realistic photon-to-electron ratio. The results may be relevant to the prompt emission of Gamma-ray Bursts (GRBs), Tidal Disruption Events (TDEs), and other high-energy transients where optically thick outflows are present.Item The role of gas in galaxy evolution : infall, star formation, and internal structure(2013-05) Barentine, John Caleb; Kormendy, JohnThe story of a typical spiral galaxy like the Milky Way is a tale of the transformation of metal-poor hydrogen gas to heavier elements through nuclear burning in stars. This gas is thought to arrive in early times during the assembly phase of a galaxy and at late times through a combination of hot and cold “flows” representing external evolutionary processes that continue to the present. Through a somewhat still unclear mechanism, the atomic hydrogen is converted to molecules that collect into clouds, cool, condense, and form stars. At the end of these stars’ lives, much of their constituent gas is returned to the galaxy to participate in subsequent generations of star formation. In earlier times in the history of the universe, frequent and large galaxy mergers brought additional gas to further fuel this process. However, major merger activity began an ongoing decline several Gyr ago and star formation is now diminishing; the universe is in transitioning to an era in which the structural evolution of disk galaxies is dominated by slow, internal (“secular”) processes. In this evolutionary regime, stars and the gas from which they are formed participate in resonant gravitational interactions within disks to build ephemeral structures such as bars, rings, and small scale-height central bulges. This regime is expected to last far into the future in a galaxy like the Milky Way, punctuated by the periodic accretion of dwarf satellite galaxies but lacking in the “major” mergers that kinematically scramble disks into ellipticals. This thesis examines details of the story of gas from infall to structure-building in three major parts. The High- and Intermediate-Velocity Clouds (HVCs/IVCs) are clouds of H i gas at velocities incompatible with simple models of differential Galactic rotation. Proposed ideas explaining their observed properties and origins include (1) the infall of low-metallicity material from the Halo, possibly as cold flows along filaments of a putative “Cosmic Web”; (2) gas removed from dwarf satellite galaxies orbiting the Milky Way via some combination of ram pressure stripping and tidal disruption; and (3) the supply and return feeds of a “Galactic Fountain” cycling gas between the Disk and Halo. Numerical values of their observed properties depend strongly on the Clouds’ distances. In Chapter 2, we summarize results of an ongoing effort to obtain meaningful distances to a selection of HVCs and IVCs using the absorption-line bracketing method. We find the Clouds are not at cosmological distances, and with the exception of the Magellanic Stream, they are generally situated within a few kiloparsecs of the Disk. The strongest discriminator of the above origin scenarios are the heavy element abundances of the Clouds, but to date few reliable Cloud metal- licities have been published. We used archival UV spectroscopy, supplemented by new observations with the Cosmic Origins Spectrograph aboard the Hubble Space Telescope and H I 21 cm emission spectroscopy from a variety of sources to compute elemental abundances relative to hydrogen for 39 HVC/IVC components along 15 lines of sight. Many of these are previously unpublished. We find support for all three origin scenarios enumerated above while more than doubling the number of robust measurements of HVCs/IVCs in existence. The results of this work are detailed in Chapter 3. In Chapter 4 we present the results of a spectroscopic study of the high-mass protostellar object NGC 7538 IRS 9 made with the Texas Echelon Cross Echelle Spectrograph (TEXES), a sensitive, high spectral resolution, mid-infrared grating spectrometer and compare our observations to published data on the nearby object NGC 7538 IRS 1. Forty-six individual lines in vibrational modes of the molecules C₂H₂, CH₄, HCN, NH₃ and CO were detected, including two isotopologues (¹³CO, ¹²C¹⁸O) and one combination mode ([nu]₄+[nu]₅ C₂H₂). Fitting synthetic spectra to the data yielded the Doppler shift, excitation temperature, Doppler b parameter, column density and covering factor for each molecule observed; we also computed column density upper limits for lines and species not detected, such as HNCO and OCS. We find differences among spectra of the two objects likely attributable to their differing radiation and thermal environments. Temperatures and column densities for the two objects are generally consistent, while the larger line widths toward IRS 9 result in less saturated lines than those toward IRS 1. Finally, we compute an upper limit on the size of the continuum-emitting region (~2000 AU) and use this constraint and our spectroscopy results to construct a schematic model of IRS 9. In Chapters 5 and 6, we describe studies of the bright, nearby, edge-on spiral galaxies NGC 4565 and NGC 5746, both previously classified as type Sb spirals with measured bulge-to-total luminosity ratios B/T ≃ 0.4. These ratios indicate merger-built, “classical” bulges but in reality represent the photometric signatures of bars seen end-on. We performed 1-D photometric decompositions of archival Hubble Space Telescope, Spitzer Space Telescope, and Sloan Digital Sky Survey images spanning a range of wavelengths from the optical to near-infrared that penetrate the thick midplane dust in each galaxy. In both, we find high surface brightness, central stellar components that are clearly distinct from the boxy bar and from the disk; we interpret these structures as small scale height “pseudobulges” built from disk material via internal, resonant gravitational interactions among disk material − not classical bulges. The brightness profiles of the innermost component of each galaxy is well fitted by a Sersic function with major/minor axis Sersic indices of n = 1.55±0.07 and 1.33±0.12 for NGC 4565 and n = 0.99±0.08 and 1.17 ± 0.24 for NGC 5746. The true “bulge-to-total” ratios of these galaxies are considerably smaller than once believed: 0.061+0.009 and 0.136 ± 0.019, −0.008, respectively. Therefore, more galaxies than we thought contain little or no evidence of a merger-built classical bulge. We argue further that a classical bulge cannot hide behind the dust lane of either galaxy and that other structures built exclusively through secular evolution processes such as inner rings, both revealed through the infrared imagery, argue strongly against any merger violence in the recent past history of these objects. From a formation point of view, NGC 4565 and NGC 5746 are giant, pure-disk galaxies, and we do not understand how such galaxies form in a ΛCDM universe. This presents a challenge to our picture of galaxy formation by hierarchical clustering because it is difficult to grow galaxies as large as these without making big, classical bulges. We summarize the work presented in this thesis in Chapter 7 and conclude with speculations about the future direction of research in this field.Item Simulations of high-energy astrophysical phenomena(2014-12) Lindner, Christopher Carl; Milosavljević, MilošSupercomputer technology has revolutionized our studies of the most energetic astrophysical phenomena. Here, I present my simulations of energetic outbursts of gamma rays and the explosions of massive stars, and my efforts to further the computational astrophysics frontier with the development of a radiation hydrodynamics code. First, I present axisymmetric hydrodynamical simulations of the long-term accretion of a rotating gamma-ray burst (GRB) progenitor star, a "collapsar," onto the central compact object, which we assume is a black hole. The simulations were carried out with the adaptive mesh refinement code FLASH in two spatial dimensions and with an explicit shear viscosity. The evolution of the central accretion rate exhibits phases reminiscent of the long GRB [gamma]-ray and X-ray light curve, which lends support to the proposal by Kumar et al. (2008a,b) that the luminosity is modulated by the central accretion rate. In the first "prompt" phase, the black hole acquires most of its final mass through supersonic quasiradial accretion occurring at a steady rate of ~ 0.2 [solar mass] s⁻¹. After a few tens of seconds, an accretion shock sweeps outward through the star. The formation and outward expansion of the accretion shock is accompanied by a sudden and rapid power-law decline in the central accretion rate [mathematical formula], which resembles the L [subscript x] [is proportional to] t⁻³ decline observed in the X-ray light curves. The collapsed, shock-heated stellar envelope settles into a thick, low-mass equatorial disk embedded within a massive, pressure-supported atmosphere. After a few hundred seconds, the inflow of low-angular-momentum material in the axial funnel reverses into an outflow from the thick disk. Meanwhile, the rapid decline of the accretion rate slows, which is potentially suggestive of the "plateau"' phase in the X-ray light curve. We complement our adiabatic simulations with an analytical model that takes into account the cooling by neutrino emission and estimate that the duration of the prompt phase will be ~ 20 s. The model suggests that the steep decline in GRB X-ray light curves is triggered by the circularization of the infalling stellar envelope at radii where the virial temperature is below 10¹⁰ K, such that neutrino cooling is inefficient and an outward expansion of the accretion shock becomes imminent; GRBs with longer prompt [gamma]-ray emission should have more slowly rotating envelopes. Observational evidence suggests a link between long GRBs and Type Ic supernovae. I propose a potential mechanism for Type Ic supernovae in LGRB progenitors powered solely by accretion energy. I present spherically-symmetric hydrodynamic simulations of the long-term accretion of a rotating gamma-ray burst progenitor star, a "collapsar," onto the central compact object, which we take to be a black hole. The simulations were carried out with the adaptive mesh refinement code FLASH in one spatial dimension and with rotation, explicit shear viscosity, and convection in the mixing length theory approximation. Once the accretion flow becomes rotationally supported outside of the black hole, an accretion shock forms and traverses the stellar envelope. Energy is carried from the central geometrically thick accretion disk to the stellar envelope by convection. Energy losses through neutrino emission and nuclear photodisintegration are calculated but do not seem important following the rapid early drop of the accretion rate following circularization. We find that the shock velocity, energy, and unbound mass are sensitive to convective efficiency, effective viscosity, and initial stellar angular momentum. Our simulations show that given the appropriate combinations of stellar and physical parameters, explosions with energies ~ 5 x 10⁵⁰ ergs, velocities ~ 3000 km s⁻¹, and unbound material masses > 5 [solar mass] are possible in a rapidly rotating 16 [solar mass] main sequence progenitor star. Further work is needed to constrain the values of these parameters, to identify the likely outcomes in more plausible and massive LRGB progenitors, and to explore nucleosynthetic implications. In many high-energy astrophysical phenomena, the force of radiation pressure will have a direct effect on the hydrodynamics. Observing radiation is also the primary way we investigate our universe. With this in mind, I present my expansion of the FLASH hydrodynamics code, where I have implemented a gray, flux-limited diffusion (FLD) radiation hydrodynamics (RHD) solver. My solver utilizes the FLASH's diffusion packages that are powered by HYPRE. I have written a new, efficient radiation-matter coupling solver, which exactly integrates the equations for radiation-matter coupling and operates without any time step restrictions. I have also rewritten the unsplit hydrodynamics solver in FLASH to incorporate the changes in PPM characteristic tracing and the Riemann solver required to properly capture the radiation pressure force in regions that are not entirely optically thick. This has required the addition of a new Riemann solver to FLASH, similar to the Riemann solver in the CASTRO RHD code. I then present my validation tests of the code. This code will be made publicly available.Item Steady-state spherical accretion using smoothed particle hydrodynamics(2011-12) Baumann, Mark Chapple; Matzner, Richard A. (Richard Alfred), 1942-; Dicus, Duane; Klein, Josh; Kopp, Sacha; Marder, MichaelDue to its adaptable nature in a broad range of problem domains, Smoothed Particle Hydrodynamics (SPH) is a popular numerical technique for computing solutions in astrophysics. This dissertation discusses the SPH technique and assesses its capabilities for reproducing steady-state spherically-symmetric accretion flow. The accretion scenario is of great interest for its applicability in a diverse array of astrophysical phenomena and, under certain assumptions, it also provides an accepted analytical solution against which the numerical method can be validated. After deriving the necessary equations from astrophysical fluid dynamics, giving a detailed review of solving the steady-state spherical accretion problem, and developing the SPH methodology, this work suggests solutions to the issues that must be overcome in order to successfully employ the SPH methodology to reproduce steady-state spherical accretion flow. Several techniques for setting initial data are addressed, resolution requirements are illustrated, inner and outer boundary conditions are discussed, and artificial dissipation parameters and methodologies are explored.Item Towards understanding magnetic field generation in relativistic shocks with GRB afterglow observations and the GRB radiation mechanism with photospheric simulations and the X-ray flare radiation mechanism(2015-12) Santana, Rodolfo; Kumar, Pawan; Milosavljevic, Milos; Robinson, Edward L; Wheeler, Craig; Matzner, Richard AIn this thesis, we present three projects on open questions in the Gammaray Burst (GRB) field. In the first project, we used X-ray and optical observations to determine the amount of amplification of the ISM magnetic field needed to explain the GRB afterglow observations. We determined that mild amplification is required, at a level stronger than shock-compression but weaker than predicted by the Weibel mechanism. In the second project, we present a Monte Carlo code we wrote from scratch to perform realistic simulations of the photospheric process, one of the mechanisms considered to explain the GRB gamma-ray emission. We determined that photospheric emission can explain the GRB gamma-ray spectrum above the peak-energy if the photons are taken to have a temperature much smaller than the electron temperature and if the interactions between photons and electrons take place at a large optical depth. In the third project, we used multi-wavelength observations to constrain the X-ray flare radiation mechanism. We determined that synchrotron from a Poynting jet and the Photospheric process are the best candidates to explain the X-ray flare observations.